Protein ZmFARL13
ZmFARL13 is a protein in the FAR1-like family.
Information
TF Name: ZmFARL13
Species: Maize
TF Family: FAR1-like
Gene Name(Synonym): FARL13
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmFARL13

ZmFARL13 is a protein in the FAR1-like family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d022142DAPseq no logo sequence fimo position
Zm00001d022142DAPseq no logo sequence fimo position
Zm00001d022142ChIPseq no logo sequence fimo position
Zm00001d022142PChIPseq no logo sequence fimo position

Interactions where ZmFARL13 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmFARL13 is the target  
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There are 30 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d022142_T001 from maize genome v4

Amino Acid Sequence
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MMHMLVAPDRGGGELQPYVAPPAEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKM
RRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLE
AKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQPGEAELSDDSVVTPTTKATGDL
VVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTMQIDEDDKLTNFFWADQKSRDDFNY
FGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFKIAMHGKQPAVALIDQSIPLSSAMA
AAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRSMLEKYDLRHNEWLSKVFAEKEQWA
LAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHTY
TPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRNI
KELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQFLACIRMHLIEALNAGTCRVNAND
AFIPCKTPQRWPLKKHWMGRPPSRFNHACVHRVRLGAVGH

MMHMLVAPDRGGGELQPYVAPPAEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKM
RRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLE
AKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQPGEAELSDDSVVTPTTKATGDL
VVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTMQIDEDDKLTNFFWADQKSRDDFNY
FGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFKIAMHGKQPAVALIDQSIPLSSAMA
AAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRSMLEKYDLRHNEWLSKVFAEKEQWA
LAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHTY
TPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRNI
KELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQFLACIRMHLIEALNAGTCRVNAND
AFIPCKTPQRWPLKKHWMGRPPSRFNHACVHRVRLGAVGH

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ACGCGTCGGACGATGGACGCTGCCG...

GRMZM2G114461_T01 from maize genome v3


Related TFome: pUT1768

Amino Acid Sequence
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MMHMLVAPDRGGGELQPYVAPPAEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKM
RRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLE
AKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQPGEAELSDDSVVTPTTKATGDL
VVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTMQIDEDDKLTNFFWADQKSRDDFNY
FGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFKIAMHGKQPAVALIDQSIPLSSAMA
AAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRSMLEKYDLRHNEWLSKVFAEKEQWA
LAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHTY
TPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRNI
KELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQDASVSSMH

Nucleotide Sequence
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CAGCGGATCCCGCTGACTCCTCCGC...

GRMZM2G114461_T02 from maize genome v3

Amino Acid Sequence
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MRRGPDGPRTLCNACGIAYRKGKMRRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSS
ENITKVRTFVCSREGYNRDKKSLEAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTE
LQPGEAELSDDSVVTPTTKATGDLVVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTM
QIDEDDKLTNFFWADQKSRDDFNYFGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFK
IAMHGKQPAVALIDQSIPLSSAMAAAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRS
MLEKYDLRHNEWLSKVFAEKEQWALAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQA
DFQASQSYPRIPPAKMLKQTAHTYTPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLC
TCRKFEFMGIPCCHMLKVLDYRNIKELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQ
DASVSSMH

Nucleotide Sequence
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CAGCGGATCCCGCTGACTCCTCCGC...

Zm00001d022142_T002 from maize genome v4

Amino Acid Sequence
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MMHMLVAPDRGGGELQPYVAPPAEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKM
RRMIEAEPPIDEAALAKLVPEHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHTYTPVVFEIFRKEFELFMDSV
LFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRNIKELPQKYLLKRWRRTAKSA
NEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQFLACIRMHLIEALNAGTCRVNANDAFIPCKTPQRWPLKKHWMG
RPPSRFNHACVHRVRLGAVGH

Nucleotide Sequence
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ACGCGTCGGACGATGGACGCTGCCG...

Zm00001d022142_T003 from maize genome v4

Amino Acid Sequence
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MRRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSL
EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQPGEAELSDDSVVTPTTKATGD
LVVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTMQIDEDDKLTNFFWADQKSRDDFN
YFGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFKIAMHGKQPAVALIDQSIPLSSAM
AAAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRSMLEKYDLRHNEWLSKVFAEKEQW
ALAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHT
YTPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRN
IKELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQDASVSSMH

Nucleotide Sequence
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GCACGAGGGCCACCTACCCTGTTGC...

Zm00001d022142_T004 from maize genome v4

Amino Acid Sequence
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MMHMLVAPDRGGGELQPYVAPPAEQELELLRDNADDGLEGHVRCLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKM
RRMIEAEPPIDEAALAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNRDKKSLE
AKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRILTELQPGEAELSDDSVVTPTTKATGDL
VVRQVSFLRSLSLLPADYKNYLRSKRMKAMQPGDGGAILKYLQTMQMDNPSFFYTMQIDEDDKLTNFFWADQKSRDDFNY
FGDVLCLDTTYKINGYGRPLALFLGVNHHKQTIIFGAAMLYDESFDSYKWLFDSFKIAMHGKQPAVALIDQSIPLSSAMA
AAWPSTTQRICAWHVYQNSLKHLNHVFQGSKTFAKDFGKCVFGYEDEDEFVFSWRSMLEKYDLRHNEWLSKVFAEKEQWA
LAYDRHIFCADIISALQAESFSSILKKFLSPQLELLSFFKHYERAVDEHRYAELQADFQASQSYPRIPPAKMLKQTAHTY
TPVVFEIFRKEFELFMDSVLFSCGEAGTTSEYKVASSEKPKEHFVRFDSSDCSCLCTCRKFEFMGIPCCHMLKVLDYRNI
KELPQKYLLKRWRRTAKSANEDNEGNATNANNGSLLIVPAPPTNHHGLQSFSAMIQDASVSSMH

Nucleotide Sequence
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CTCCCCTGCGTCTGCTCGTCGTCTC...


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